2023
- Accelerating HE Operations from Key Decomposition Technique [pdf]
- Miran Kim, Dongwon Lee, Jinyeong Seo, Yongsoo Song
- Advances in Cryptology – CRYPTO, 2023
- COLLAGENE enables privacy-aware federated and collaborative genomic data analysis [pdf]
- Wentao Li, Miran Kim, Kai Zhang, Han Chen, Xiaoqian Jiang, Arif Ozgun Harmanci
- Genome Biology; 2023.
2022
- Secure Human Action Recognition by Encrypted Neural Network Inference [pdf]
- Miran Kim, Xiaoqian Jiang, Kristin Lauter, Elkhan Ismayilzada, Shayan Shams
- Nature Communications; 13(1), 1-13, 2022.
- Privacy-Aware Estimation of Relatedness in Admixed Populations [pdf]
- Su Wang, Miran Kim, Wentao Li, Xiaoqian Jiang, Han Chen, Arif Harmanci
- Briefings in Bioinformatics; 23(6), 1-16, 2022.
- The Evolving Privacy and Security Concerns for Genomic Data Analysis and Sharing as Observed from the iDASH Competition [pdf]
- Tsung-Ting Kuo, Xiaoqian Jiang, Haixu Tang, XiaoFeng Wang, Arif Harmanci, Miran Kim, Kai Post, Diyue Bu, Tyler Bath, Jihoon Kim, Weijie Liu, Hongbo Chen, Lucila Ohno-Machado
- Journal of the American Medical Informatics Association; 29(12), 2182-2190, 2022.
- Evaluation of Vicinity-based Hidden Markov Models for Genotype Imputation [pdf]
- Su Wang, Miran Kim, Xiaoqian Jiang, Arif O. Harmanci
- BMC Bioinformatics; 23(356), 1-26, 2022.
- SVAT: Secure Outsourcing of Variant Annotation and Genotype Aggregation [pdf]
- Miran Kim, Su Wang, Xiaoqian Jiang, Arif O. Harmanci
- BMC Bioinformatics; 23(409), 1-39, 2022.
- Trusted Monitoring Service [pdf]
- Xiaoqian Jiang, Miran Kim, Kristin Lauter, Tim Scott, Shayan Shams
- Protecting Privacy through Homomorphic Encryption; 87-95, Springer, Cham, 2022.
- Introduction to Homomorphic Encryption and Schemes [pdf]
- Jung Hee Cheon, Anamaria Costache, Radames Cruz Moreno, Wei Dai, Nicolas Gama, Mariya Geogieva, Shai Halevi, Miran Kim, Sunwoong Kim, Kim Laine, Yuriy Polyakov, Yongsoo Song
- Protecting Privacy through Homomorphic Encryption; 3-28, Springer, Cham, 2022.
2021
- Ultra-Fast Homomorphic Encryption Models enable Secure Outsourcing of Genotype Imputation [pdf] [code]
- Miran Kim, Arif Harmanci, Jean-Philippe Bossuat, Sergiu Carpov, Jung Hee Cheon, Ilaria Chillotti, Wonhee Cho, David Froelicher, Nicolas Gama, Mariya Georgieva, Seungwan Hong, Jean-Pierre Hubaux, Duhyeong Kim, Kristin Lauter, Yiping Ma, Lucila Ohno-Machado, Heidi Sofia, Yongha Son, Yongsoo Song, Juan Troncoso-Pastoriza, Xiaoqian Jiang
- Cell Systems; 12(10), 950-952, 2021. (IF:11.091)
- Efficient Homomorphic Conversion Between (Ring) LWE Ciphertexts [pdf]
- Hao Chen, Wei Dai, Miran Kim, Yongsoo Song
- Proceedings of the International Conference on Applied Cryptography and Network Security (ACNS), 2021.
- Open Imputation Server Provides Secure Imputation Services with Provable Genomic Privacy [pdf]
- Arif O. Harmanci, Miran Kim, Su Wang, Wentao Li, Yongsoo Song, Kristin Lauter, Xiaoqian Jiang
- biorXiv:2021.09.30.462262. (2021).
2020
- Maliciously Secure Matrix Multiplication with Applications to Private Deep Learning [pdf]
- Hao Chen, Miran Kim, Ilya Razenshteyn, Dragos Rotaru, Yongsoo Song, Sameer Wagh
- Advances in Cryptology – ASIACRYPT, 2020.
- Homomorphic Computation of Local Alignment [pdf]
- Magsarjav Bataa, Siwoo Song, Kunsoo Park, Miran Kim, Jung Hee Cheon, and Sun Kim.
- Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2020.
- A Secure System for Genomics Clinical Decision Support [pdf]
- Seemeen Karimi, Xiaoqian Jiang, Robert Dolin, Miran Kim, Aziz Boxwala
- Journal of Biomedical Informatics; 112, 2020.
- Semi-Parallel Logistic Regression for GWAS on Encrypted Data [pdf]
- Miran Kim, Yongsoo Song, Baiyu Li, Daniele Micciancio
- BMC Medical Genomics; 13(7):1-13, 2020.
- SCOR: A secure international informatics infrastructure to investigate COVID-19 [pdf]
- J L Raisaro, Francesco Marino, Juan Troncoso-Pastoriza, Raphaelle Beau-Lejdstrom, Riccardo Bellazzi, Robert Murphy, Elmer V Bernstam, Henry Wang, Mauro Bucalo, Yong Chen, Assaf Gottlieb, Arif Harmanci, Miran Kim, Yejin Kim, Jeffrey Klann, Catherine Klersy, Bradley A Malin, Marie Méan, Fabian Prasser, Luigia Scudeller, Ali Torkamani, Julien Vaucher, Mamta Puppala, Stephen T C Wong, Milana Frenkel-Morgenstern, Hua Xu, Baba Maiyaki Musa, Abdulrazaq G Habib, Trevor Cohen, Adam Wilcox, Hamisu M Salihu, Heidi Sofia, Xiaoqian Jiang, Jean-Pierre Hubaux
- Journal of the American Medical Informatics Association (JAMIA); ocaa172, 2020.
- Secure and Differentially Private Bayesian Learning on Distributed Data [pdf]
- Yeongjae Gil, Xiaoqian Jiang, Miran Kim, Junghye Lee
- arXiv:2005.11007. (2020).
2019
- Efficient Multi-Key Homomorphic Encryption with Packed Ciphertexts with Application to Oblivious Neural Network Inference [pdf]
- Hao Chen, Wei Dai, Miran Kim, Yongsoo Song
- Proceedings of the ACM SIGSAC Conference on Computer and Communications Security (CCS), 2019.
- Secure and Differentially Private Logistic Regression for Horizontally Distributed Data [pdf]
- Miran Kim, Junghye Lee, Lucila Ohno-Machado, Xiaoqian Jiang
- IEEE Transactions on Information Forensics and Security (TIFS); 15(1):695-710, 2019.
- SecureLR: Secure Logistic Regression Model via a Hybrid Cryptographic Protocol [pdf]
- Yichen Jiang, Jenny Hamer, Chenghong Wang, Xiaoqian Jiang, Miran Kim, Yongsoo Song, Yuhou Xia, Noman Mohammed, Md Nazmus Sadat, Shuang Wang
- IEEE/ACM Transactions on Computational Biology and Bioinformatics; 16(1):113-123, 2019.
2018
- Secure Outsourced Matrix Computation and Application to Neural Networks [pdf] [code]
- Xiaoqian Jiang, Miran Kim, Kristin Lauter, Yongsoo Song
- Proceedings of the ACM SIGSAC Conference on Computer and Communications Security (CCS), 2018.
- A Full RNS Variant of Approximate Homomorphic Encryption [pdf] [code]
- Jung Hee Cheon, Kyoohyung Han, Andrey Kim, Miran Kim, Yongsoo Song
- Proceedings of the International Conference on Selected Areas in Cryptography (SAC), 2018.
- Bootstrapping for Approximate Homomorphic Encryption [pdf] [code]
- Jung Hee Cheon, Kyoohyung Han, Andrey Kim, Miran Kim, Yongsoo Song
- Advances in Cryptology – EUROCRYPT, 2018
- Logistic Regression Model Training based on the Approximate Homomorphic Encryption [pdf] [code]
- Andrey Kim, Yongsoo Song, Miran Kim, Kiwoo Lee, Jung Hee Cheon
- BMC Medical Genomics; 11(Suppl 4):83, 2018.
- Secure Logistic Regression Based on Homomorphic Encryption: Design and Evaluation [pdf] [code]
- Miran Kim, Yongsoo Song, Shuang Wang, Yuhou Xia, Xiaoqian Jiang
- JMIR Medical Informatics; 6(2), 2018.
2017
- Homomorphic Encryption for Arithmetic of Approximate Numbers [pdf] [code]
- Jung Hee Cheon, Andrey Kim, Miran Kim, Yongsoo Song
- Advances in Cryptology – ASIACRYPT, 2017.
- A Standard API FOR RLWE-based Homomorphic Encryption [pdf]
- Michael Brenner, Wei Dai, Shai Halevi, Kyoohyung Han, Amir Jalali, Miran Kim, Kim Laine, Alex Malozemoff, Pascal Paillier, Yuriy Polyakov, Kurt Rohloff, Erkay Savas, Berk Sunar
- Draft Homomorphic Encryption Standard, available at HomomorphicEncryption.org. 2017.
- Secure Searching of Biomarkers Using Hybrid Homomorphic Encryption Scheme [pdf] [code]
- Miran Kim, Yongsoo Song, Jung Hee Cheon
- BMC Medical Genomics; 10(42), 2017.
2016
- Encrypting Controller using Fully Homomorphic Encryption for Security of Cyber-Physical Systems [pdf]
- Junsoo Kim, Chanhwa Lee, Hyungboo Shim, Jung Hee Cheon, Andrey Kim, Miran Kim, Yongsoo Song
- Proceedings of the IFAC Workshop on Distributed Estimation and Control in Networked Systems (NECSYS), 2016.
- Optimized Search-and-Compute Circuits and Their Application to Query Evaluation on Encrypted Data [pdf]
- Jung Hee Cheon, Miran Kim, Myungsun Kim
- IEEE Transactions on Information Forensics and Security (TIFS); 11(1):188–199, 2016.
- HEALER: Homomorphic computation of ExAct Logistic rEgRession for secure rare disease variants analysis in GWAS [pdf]
- Shuang Wang, Yuchen Zhang, Wenrui Dai, Kristin Lauter, Miran Kim, Yuzhe Tang, Hongkai Xiong, Xiaoqian Jiang
- Bioinformatics; 32(2):211–218, 2016.
2015
- Search-and-Compute on Encrypted Data [pdf]
- Jung Hee Cheon, Miran Kim, Myungsun Kim
- Proceedings of the Financial Cryptography and Data Security (FC), 2015.
- Homomorphic Computation of Edit Distance [pdf]
- Jung Hee Cheon, Miran Kim, Kristin Lauter
- Proceedings of the Financial Cryptography and Data Security (FC), 2015.
- SECRET: Secure Edit-distance Computation over homomoRphic Encrypted daTa [pdf]
- Yuchen Zhang, Wenrui Dai, Shuang Wang, Miran Kim, Kristin Lauter, Jun Sakuma, Hongkai Xiong, Xiaoqian Jiang
- Annual Translational Bioinformatics Conference (TBC), 2015.
- Private Genome Analysis through Homomorphic Encryption [pdf]
- Miran Kim, Kristin Lauter
- BMC medical informatics and decision making; 15(Suppl 5):S3, 2015.